Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh15Q99PJ1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gm7895-201ENSMUST00000187459 1173 ntBASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 AC155637.1-201ENSMUST00000218560 636 ntBASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh15Q99PJ1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Prob1-201ENSMUST00000097619 3021 ntBASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 AC132317.1-201ENSMUST00000227227 962 ntBASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh15Q99PJ1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm15371-201ENSMUST00000117057 784 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm26927-201ENSMUST00000182385 965 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh15Q99PJ1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Gm37008-201ENSMUST00000195712 319 ntBASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Cts7-204ENSMUST00000225321 1257 ntBASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdh15Q99PJ1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms