Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Gm45098-201ENSMUST00000207179 657 ntBASIC15.64■□□□□ 0.09
Tlr3Q99MB1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Gm9182-201ENSMUST00000217829 639 ntBASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Tlr3Q99MB1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Gm6973-201ENSMUST00000117080 721 ntBASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Gm5479-201ENSMUST00000160578 435 ntBASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Gm45612-201ENSMUST00000211320 160 ntBASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Tlr3Q99MB1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Gm13616-201ENSMUST00000120600 222 ntBASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Gm11543-201ENSMUST00000120758 370 ntBASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tlr3Q99MB1 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tlr3Q99MB1 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms