Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mir8117-201ENSMUST00000184773 107 ntBASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdha8Q91Y12 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pcdha8Q91Y12 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Gm16026-204ENSMUST00000162652 683 ntBASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Gm27301-201ENSMUST00000184012 127 ntBASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Pcdha8Q91Y12 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdha8Q91Y12 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Gm17968-201ENSMUST00000194902 784 ntBASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Gm6443-201ENSMUST00000203599 874 ntBASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Gm45747-201ENSMUST00000212203 999 ntBASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdha8Q91Y12 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms