Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pcdhac1Q91Y10 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Gm44771-201ENSMUST00000206975 626 ntBASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pcdhac1Q91Y10 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhac1Q91Y10 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Gm12008-201ENSMUST00000117791 755 ntBASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhac1Q91Y10 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms