Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Gm44061-201ENSMUST00000203962 1195 ntBASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.28□□□□□ -0.12
Pcdhb20Q91XZ9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdhb20Q91XZ9 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm11543-201ENSMUST00000120758 370 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm18737-201ENSMUST00000173594 937 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm18889-201ENSMUST00000174284 929 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm27427-201ENSMUST00000185134 193 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Gm45074-201ENSMUST00000209091 1240 ntBASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdhb20Q91XZ9 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 AC154806.5-202ENSMUST00000227217 1443 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm14938-201ENSMUST00000119482 943 ntBASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdhb20Q91XZ9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms