Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Brf1Q8CFK2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Gm44335-201ENSMUST00000196879 141 ntBASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Gm44297-201ENSMUST00000198304 141 ntBASIC17.59■□□□□ 0.41
Brf1Q8CFK2 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Gm44346-201ENSMUST00000198851 141 ntBASIC17.59■□□□□ 0.41
Brf1Q8CFK2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Brf1Q8CFK2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Brf1Q8CFK2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brf1Q8CFK2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brf1Q8CFK2 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Brf1Q8CFK2 Gm6756-201ENSMUST00000180647 1620 ntBASIC17.58■□□□□ 0.41
Brf1Q8CFK2 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Brf1Q8CFK2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.58■□□□□ 0.41
Brf1Q8CFK2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Gm43575-201ENSMUST00000196420 516 ntBASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Brf1Q8CFK2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Gm6736-201ENSMUST00000166583 948 ntBASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Mir6990-201ENSMUST00000183724 91 ntBASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Gm44645-201ENSMUST00000205492 1653 ntBASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Brf1Q8CFK2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm23935-201ENSMUST00000102303 57 ntBASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm24270-201ENSMUST00000102326 57 ntBASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.56■□□□□ 0.4
Brf1Q8CFK2 Gm24245-201ENSMUST00000157318 57 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms