Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm24513-201ENSMUST00000174964 138 ntBASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.67■□□□□ 0.1
Vcpip1Q8CDG3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Vcpip1Q8CDG3 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Gm10576-201ENSMUST00000191927 825 ntBASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Vcpip1Q8CDG3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Vcpip1Q8CDG3 Gm14494-201ENSMUST00000118786 435 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms