Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm21794-201ENSMUST00000187056 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21880-201ENSMUST00000187275 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21826-201ENSMUST00000187451 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21198-201ENSMUST00000188393 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21749-201ENSMUST00000189343 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21901-201ENSMUST00000189568 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm29424-201ENSMUST00000189716 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm28599-201ENSMUST00000189838 694 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21867-201ENSMUST00000189917 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm29269-201ENSMUST00000190087 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21722-201ENSMUST00000190153 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm28423-201ENSMUST00000190701 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21899-201ENSMUST00000190745 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21910-201ENSMUST00000191163 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21849-201ENSMUST00000191571 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm28678-201ENSMUST00000191593 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm20910-201ENSMUST00000193268 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm21871-201ENSMUST00000194621 696 ntBASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Usp44Q8C2S0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Gm8396-201ENSMUST00000057361 823 ntBASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Usp44Q8C2S0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Usp44Q8C2S0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Gm18049-201ENSMUST00000208909 581 ntBASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Usp44Q8C2S0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms