Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Gm13813-201ENSMUST00000120998 787 ntBASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Chd9Q8BYH8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gm9368-201ENSMUST00000219348 831 ntBASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gm9229-201ENSMUST00000222777 126 ntBASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gm42627-201ENSMUST00000197347 224 ntBASIC11.34□□□□□ -0.59
Chd9Q8BYH8 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chd9Q8BYH8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Chd9Q8BYH8 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chd9Q8BYH8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms