Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm14822-201ENSMUST00000122247 291 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm27702-201ENSMUST00000184512 56 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.16□□□□□ -0.14
Cpsf4Q8BQZ5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Gm2213-201ENSMUST00000197485 688 ntBASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Gm43767-201ENSMUST00000198933 381 ntBASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cpsf4Q8BQZ5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cpsf4Q8BQZ5 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cpsf4Q8BQZ5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cpsf4Q8BQZ5 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cpsf4Q8BQZ5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms