Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.72□□□□□ -0.21
Clrn3Q8BHH8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gm13597-201ENSMUST00000121239 375 ntBASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gm27301-201ENSMUST00000184012 127 ntBASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gm43514-201ENSMUST00000198852 424 ntBASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clrn3Q8BHH8 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Clrn3Q8BHH8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn3Q8BHH8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn3Q8BHH8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Clrn3Q8BHH8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.71□□□□□ -0.22
Clrn3Q8BHH8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clrn3Q8BHH8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Gm5177-201ENSMUST00000183092 997 ntBASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clrn3Q8BHH8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gm12260-201ENSMUST00000122447 411 ntBASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gm10154-201ENSMUST00000084445 354 ntBASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.69□□□□□ -0.22
Clrn3Q8BHH8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms