Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm23935-201ENSMUST00000102303 57 ntBASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm24270-201ENSMUST00000102326 57 ntBASIC14.38□□□□□ -0.11
Ubp1Q811S7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Rprl2-201ENSMUST00000157150 290 ntBASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm24245-201ENSMUST00000157318 57 ntBASIC14.38□□□□□ -0.11
Ubp1Q811S7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm5867-201ENSMUST00000063197 592 ntBASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubp1Q811S7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.37□□□□□ -0.11
Ubp1Q811S7 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Gm18057-201ENSMUST00000208220 503 ntBASIC14.37□□□□□ -0.11
Ubp1Q811S7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.37□□□□□ -0.11
Ubp1Q811S7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.37□□□□□ -0.11
Ubp1Q811S7 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubp1Q811S7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Gm11543-201ENSMUST00000120758 370 ntBASIC14.36□□□□□ -0.11
Ubp1Q811S7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Gm9726-201ENSMUST00000180321 678 ntBASIC14.36□□□□□ -0.11
Ubp1Q811S7 Gm27920-201ENSMUST00000183953 96 ntBASIC14.36□□□□□ -0.11
Ubp1Q811S7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.36□□□□□ -0.11
Ubp1Q811S7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.36□□□□□ -0.11
Ubp1Q811S7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.36□□□□□ -0.11
Ubp1Q811S7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ubp1Q811S7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ubp1Q811S7 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms