Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube3cQ80U95 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube3cQ80U95 Syt7-205ENSMUST00000224135 1557 ntBASIC17.14■□□□□ 0.33
Ube3cQ80U95 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube3cQ80U95 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Ube3cQ80U95 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ube3cQ80U95 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.14■□□□□ 0.33
Ube3cQ80U95 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Sybu-209ENSMUST00000228639 4113 ntBASIC17.13■□□□□ 0.33
Ube3cQ80U95 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.13■□□□□ 0.33
Ube3cQ80U95 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.13■□□□□ 0.33
Ube3cQ80U95 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Gm12882-201ENSMUST00000121696 517 ntBASIC17.13■□□□□ 0.33
Ube3cQ80U95 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.13■□□□□ 0.33
Ube3cQ80U95 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ube3cQ80U95 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Gm37728-201ENSMUST00000195025 2292 ntBASIC17.12■□□□□ 0.33
Ube3cQ80U95 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Gm7390-201ENSMUST00000212452 1216 ntBASIC17.12■□□□□ 0.33
Ube3cQ80U95 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.12■□□□□ 0.33
Ube3cQ80U95 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ube3cQ80U95 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.11■□□□□ 0.33
Ube3cQ80U95 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Gm6218-201ENSMUST00000219812 628 ntBASIC17.11■□□□□ 0.33
Ube3cQ80U95 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ube3cQ80U95 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Gm22189-201ENSMUST00000103822 86 ntBASIC17.1■□□□□ 0.33
Ube3cQ80U95 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Gm9522-201ENSMUST00000182394 926 ntBASIC17.1■□□□□ 0.33
Ube3cQ80U95 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ube3cQ80U95 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.1■□□□□ 0.33
Ube3cQ80U95 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ube3cQ80U95 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms