Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Gm7775-201ENSMUST00000218871 853 ntBASIC13.46□□□□□ -0.25
Pif1Q80SX8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pif1Q80SX8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.46□□□□□ -0.26
Pif1Q80SX8 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.46□□□□□ -0.26
Pif1Q80SX8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pif1Q80SX8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Syt7-204ENSMUST00000223586 1344 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gm5479-201ENSMUST00000160578 435 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gm27838-201ENSMUST00000184829 128 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.45□□□□□ -0.26
Pif1Q80SX8 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Pif1Q80SX8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.44□□□□□ -0.26
Pif1Q80SX8 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm24543-201ENSMUST00000103867 82 ntBASIC13.44□□□□□ -0.26
Pif1Q80SX8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm5566-201ENSMUST00000116118 459 ntBASIC13.44□□□□□ -0.26
Pif1Q80SX8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm9719-201ENSMUST00000162765 543 ntBASIC13.44□□□□□ -0.26
Pif1Q80SX8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Pif1Q80SX8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pif1Q80SX8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms