Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm9109-201ENSMUST00000120254 1405 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm15376-201ENSMUST00000122258 783 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm18187-201ENSMUST00000196476 984 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Gm18905-201ENSMUST00000205454 928 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nup98Q6PFD9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Gm14127-201ENSMUST00000117906 678 ntBASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Gm13385-201ENSMUST00000121089 220 ntBASIC16.91■□□□□ 0.3
Nup98Q6PFD9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nup98Q6PFD9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nup98Q6PFD9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nup98Q6PFD9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nup98Q6PFD9 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms