Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Gm7230-201ENSMUST00000173026 815 ntBASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcd3Q6P9Z1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Gm15173-201ENSMUST00000122049 433 ntBASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Smarcd3Q6P9Z1 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Gm6550-201ENSMUST00000187574 993 ntBASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Gm18246-201ENSMUST00000221023 728 ntBASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcd3Q6P9Z1 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms