Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Trim27Q62158 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim27Q62158 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.89■□□□□ 0.45
Trim27Q62158 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.89■□□□□ 0.45
Trim27Q62158 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Trim27Q62158 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim27Q62158 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.89■□□□□ 0.45
Trim27Q62158 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.89■□□□□ 0.45
Trim27Q62158 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.89■□□□□ 0.45
Trim27Q62158 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Trim27Q62158 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Trim27Q62158 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.89■□□□□ 0.45
Trim27Q62158 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim27Q62158 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim27Q62158 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim27Q62158 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Gm10275-202ENSMUST00000168697 495 ntBASIC17.88■□□□□ 0.45
Trim27Q62158 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim27Q62158 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trim27Q62158 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.88■□□□□ 0.45
Trim27Q62158 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Gm10275-201ENSMUST00000092620 635 ntBASIC17.88■□□□□ 0.45
Trim27Q62158 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.88■□□□□ 0.45
Trim27Q62158 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim27Q62158 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim27Q62158 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.88■□□□□ 0.45
Trim27Q62158 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim27Q62158 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim27Q62158 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim27Q62158 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.87■□□□□ 0.45
Trim27Q62158 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Rprl2-201ENSMUST00000157150 290 ntBASIC17.87■□□□□ 0.45
Trim27Q62158 Gm18889-201ENSMUST00000174284 929 ntBASIC17.87■□□□□ 0.45
Trim27Q62158 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.87■□□□□ 0.45
Trim27Q62158 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trim27Q62158 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim27Q62158 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Trim27Q62158 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim27Q62158 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim27Q62158 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms