Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm8097-201ENSMUST00000117903 829 ntBASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav15-1-dv6-1Q5R1D2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm15372-201ENSMUST00000120729 834 ntBASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms