Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17■□□□□ 0.31
Prpf38aQ4FK66 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17■□□□□ 0.31
Prpf38aQ4FK66 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17■□□□□ 0.31
Prpf38aQ4FK66 Gm15487-201ENSMUST00000122373 465 ntBASIC17■□□□□ 0.31
Prpf38aQ4FK66 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17■□□□□ 0.31
Prpf38aQ4FK66 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Prpf38aQ4FK66 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Prpf38aQ4FK66 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Gm10275-202ENSMUST00000168697 495 ntBASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Gm46209-201ENSMUST00000217912 553 ntBASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Gm10275-201ENSMUST00000092620 635 ntBASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Prpf38aQ4FK66 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Prpf38aQ4FK66 Gm14719-201ENSMUST00000121891 340 ntBASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms