Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gm6152-201ENSMUST00000151704 340 ntBASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spg11Q3UHA3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spg11Q3UHA3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm25732-201ENSMUST00000175168 60 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm2991-201ENSMUST00000173338 480 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spg11Q3UHA3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Gm6023-201ENSMUST00000118217 606 ntBASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Gm2260-201ENSMUST00000184965 657 ntBASIC13.26□□□□□ -0.29
Spg11Q3UHA3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms