Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a1Q05722 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
Col9a1Q05722 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col9a1Q05722 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Col9a1Q05722 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 Gm14579-201ENSMUST00000117068 283 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 Gm18893-201ENSMUST00000198416 943 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col9a1Q05722 Gm45453-201ENSMUST00000211758 853 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Col9a1Q05722 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Col9a1Q05722 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a1Q05722 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.24□□□□□ -0.13
Col9a1Q05722 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.23□□□□□ -0.13
Col9a1Q05722 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Gm11793-201ENSMUST00000120433 981 ntBASIC14.23□□□□□ -0.13
Col9a1Q05722 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.23□□□□□ -0.13
Col9a1Q05722 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Gm20482-202ENSMUST00000174729 825 ntBASIC14.23□□□□□ -0.13
Col9a1Q05722 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC14.23□□□□□ -0.13
Col9a1Q05722 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.23□□□□□ -0.13
Col9a1Q05722 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.23□□□□□ -0.13
Col9a1Q05722 AC165260.5-201ENSMUST00000224640 1247 ntBASIC14.23□□□□□ -0.13
Col9a1Q05722 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col9a1Q05722 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a1Q05722 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Gm15393-201ENSMUST00000120499 219 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Gm14665-201ENSMUST00000122294 557 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 Mir1943-201ENSMUST00000158276 73 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col9a1Q05722 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms