Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.51□□□□□ -0.41
Smn1P97801 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.51□□□□□ -0.41
Smn1P97801 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.51□□□□□ -0.41
Smn1P97801 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.51□□□□□ -0.41
Smn1P97801 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smn1P97801 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.51□□□□□ -0.41
Smn1P97801 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.51□□□□□ -0.41
Smn1P97801 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smn1P97801 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.51□□□□□ -0.41
Smn1P97801 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.51□□□□□ -0.41
Smn1P97801 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smn1P97801 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.51□□□□□ -0.41
Smn1P97801 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Smn1P97801 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.5□□□□□ -0.41
Smn1P97801 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.5□□□□□ -0.41
Smn1P97801 Gm18489-201ENSMUST00000172565 551 ntBASIC12.5□□□□□ -0.41
Smn1P97801 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Smn1P97801 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.5□□□□□ -0.41
Smn1P97801 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Smn1P97801 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Smn1P97801 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.49□□□□□ -0.41
Smn1P97801 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Gm4535-201ENSMUST00000182274 558 ntBASIC12.49□□□□□ -0.41
Smn1P97801 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.49□□□□□ -0.41
Smn1P97801 Mir7071-201ENSMUST00000184847 69 ntBASIC12.49□□□□□ -0.41
Smn1P97801 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.49□□□□□ -0.41
Smn1P97801 Gm33142-201ENSMUST00000193913 867 ntBASIC12.49□□□□□ -0.41
Smn1P97801 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.49□□□□□ -0.41
Smn1P97801 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Gm10355-201ENSMUST00000097146 517 ntBASIC12.49□□□□□ -0.41
Smn1P97801 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Smn1P97801 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Smn1P97801 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms