Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC20.37■□□□□ 0.85
Xrn1P97789 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC20.36■□□□□ 0.85
Xrn1P97789 CT485787.1-201ENSMUST00000225617 968 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC20.36■□□□□ 0.85
Xrn1P97789 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC20.36■□□□□ 0.85
Xrn1P97789 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Gm5940-201ENSMUST00000117582 1068 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC20.36■□□□□ 0.85
Xrn1P97789 Gm22331-201ENSMUST00000158066 136 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 Gm19184-201ENSMUST00000196798 928 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC20.36■□□□□ 0.85
Xrn1P97789 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Xrn1P97789 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Gm7399-201ENSMUST00000032395 858 ntBASIC20.36■□□□□ 0.85
Xrn1P97789 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Xrn1P97789 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Xrn1P97789 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Xrn1P97789 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 AC121801.1-201ENSMUST00000225363 1899 ntBASIC20.35■□□□□ 0.85
Xrn1P97789 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Xrn1P97789 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Xrn1P97789 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Xrn1P97789 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Xrn1P97789 Gm4271-201ENSMUST00000174444 973 ntBASIC20.35■□□□□ 0.85
Xrn1P97789 Gm24420-201ENSMUST00000176676 59 ntBASIC20.35■□□□□ 0.85
Xrn1P97789 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC20.35■□□□□ 0.85
Xrn1P97789 Gm40466-201ENSMUST00000212174 422 ntBASIC20.35■□□□□ 0.85
Xrn1P97789 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Xrn1P97789 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Gm5187-201ENSMUST00000117317 991 ntBASIC20.34■□□□□ 0.85
Xrn1P97789 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC20.34■□□□□ 0.85
Xrn1P97789 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC20.34■□□□□ 0.85
Xrn1P97789 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Gm4081-201ENSMUST00000195287 1838 ntBASIC20.34■□□□□ 0.85
Xrn1P97789 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.34■□□□□ 0.85
Xrn1P97789 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC20.34■□□□□ 0.85
Xrn1P97789 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Xrn1P97789 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.34■□□□□ 0.85
Xrn1P97789 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Gm16177-201ENSMUST00000120728 718 ntBASIC20.33■□□□□ 0.85
Xrn1P97789 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Gm38002-201ENSMUST00000193255 180 ntBASIC20.33■□□□□ 0.85
Xrn1P97789 Gm44397-201ENSMUST00000195950 113 ntBASIC20.33■□□□□ 0.85
Xrn1P97789 Gm43133-201ENSMUST00000197472 463 ntBASIC20.33■□□□□ 0.85
Xrn1P97789 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Xrn1P97789 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Xrn1P97789 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Xrn1P97789 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC20.33■□□□□ 0.85
Xrn1P97789 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Camk2g-217ENSMUST00000226630 1937 ntBASIC20.33■□□□□ 0.84
Xrn1P97789 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Xrn1P97789 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.32■□□□□ 0.84
Xrn1P97789 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Xrn1P97789 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC20.32■□□□□ 0.84
Xrn1P97789 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms