Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SgcaP82350 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SgcaP82350 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SgcaP82350 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.23□□□□□ -0.45
SgcaP82350 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SgcaP82350 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SgcaP82350 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SgcaP82350 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.23□□□□□ -0.45
SgcaP82350 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Gm18622-201ENSMUST00000219361 595 ntBASIC12.23□□□□□ -0.45
SgcaP82350 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.23□□□□□ -0.45
SgcaP82350 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
SgcaP82350 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.23□□□□□ -0.45
SgcaP82350 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SgcaP82350 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SgcaP82350 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Gm10013-201ENSMUST00000106074 672 ntBASIC12.22□□□□□ -0.45
SgcaP82350 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Gm8318-201ENSMUST00000182954 872 ntBASIC12.22□□□□□ -0.45
SgcaP82350 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Gm45328-201ENSMUST00000210942 917 ntBASIC12.22□□□□□ -0.45
SgcaP82350 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SgcaP82350 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.22□□□□□ -0.45
SgcaP82350 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.22□□□□□ -0.45
SgcaP82350 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
SgcaP82350 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcaP82350 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcaP82350 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.21□□□□□ -0.45
SgcaP82350 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.21□□□□□ -0.45
SgcaP82350 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
SgcaP82350 Matn2-206ENSMUST00000228570 2798 ntBASIC12.21□□□□□ -0.45
SgcaP82350 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcaP82350 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms