Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.79■□□□□ 0.12
CiitaP79621 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.79■□□□□ 0.12
CiitaP79621 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CiitaP79621 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
CiitaP79621 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CiitaP79621 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
CiitaP79621 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Carlr-201ENSMUST00000181515 2574 ntBASIC15.78■□□□□ 0.12
CiitaP79621 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.78■□□□□ 0.12
CiitaP79621 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gm12151-201ENSMUST00000121374 290 ntBASIC15.78■□□□□ 0.12
CiitaP79621 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CiitaP79621 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gm44344-201ENSMUST00000200287 129 ntBASIC15.78■□□□□ 0.12
CiitaP79621 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gm45453-201ENSMUST00000211758 853 ntBASIC15.78■□□□□ 0.12
CiitaP79621 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.78■□□□□ 0.12
CiitaP79621 Dupd1-202ENSMUST00000224735 548 ntBASIC15.78■□□□□ 0.12
CiitaP79621 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.78■□□□□ 0.12
CiitaP79621 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.78■□□□□ 0.12
CiitaP79621 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CiitaP79621 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Gm14057-201ENSMUST00000120631 482 ntBASIC15.77■□□□□ 0.12
CiitaP79621 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.77■□□□□ 0.12
CiitaP79621 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Gm27989-201ENSMUST00000184721 107 ntBASIC15.77■□□□□ 0.12
CiitaP79621 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CiitaP79621 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.77■□□□□ 0.12
CiitaP79621 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.77■□□□□ 0.12
CiitaP79621 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.77■□□□□ 0.12
CiitaP79621 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CiitaP79621 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CiitaP79621 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.77■□□□□ 0.11
CiitaP79621 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CiitaP79621 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CiitaP79621 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CiitaP79621 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.76■□□□□ 0.11
CiitaP79621 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.76■□□□□ 0.11
CiitaP79621 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CiitaP79621 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CiitaP79621 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms