Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Psmb5-202ENSMUST00000227257 622 ntBASIC12.87□□□□□ -0.35
Sec61a1P61620 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sec61a1P61620 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sec61a1P61620 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sec61a1P61620 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Sec61a1P61620 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sec61a1P61620 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC12.85□□□□□ -0.35
Sec61a1P61620 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Sec61a1P61620 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Sec61a1P61620 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.84□□□□□ -0.35
Sec61a1P61620 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.84□□□□□ -0.35
Sec61a1P61620 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.84□□□□□ -0.35
Sec61a1P61620 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.84□□□□□ -0.35
Sec61a1P61620 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC12.84□□□□□ -0.35
Sec61a1P61620 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC12.84□□□□□ -0.35
Sec61a1P61620 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.84□□□□□ -0.35
Sec61a1P61620 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sec61a1P61620 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms