Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.4■□□□□ 0.06
Shmt1P50431 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Shmt1P50431 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.4■□□□□ 0.06
Shmt1P50431 Gm27618-201ENSMUST00000183671 60 ntBASIC15.4■□□□□ 0.06
Shmt1P50431 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.4■□□□□ 0.06
Shmt1P50431 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Gm9182-201ENSMUST00000217829 639 ntBASIC15.4■□□□□ 0.06
Shmt1P50431 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.4■□□□□ 0.06
Shmt1P50431 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
Shmt1P50431 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Shmt1P50431 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shmt1P50431 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Shmt1P50431 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Shmt1P50431 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Shmt1P50431 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.39■□□□□ 0.05
Shmt1P50431 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.39■□□□□ 0.05
Shmt1P50431 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.39■□□□□ 0.05
Shmt1P50431 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.39■□□□□ 0.05
Shmt1P50431 Gm28630-201ENSMUST00000187806 498 ntBASIC15.39■□□□□ 0.05
Shmt1P50431 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Shmt1P50431 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.39■□□□□ 0.05
Shmt1P50431 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shmt1P50431 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Shmt1P50431 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.39■□□□□ 0.05
Shmt1P50431 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Shmt1P50431 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Shmt1P50431 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Shmt1P50431 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Shmt1P50431 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Shmt1P50431 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Shmt1P50431 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.38■□□□□ 0.05
Shmt1P50431 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.38■□□□□ 0.05
Shmt1P50431 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Shmt1P50431 Gm27430-201ENSMUST00000184585 107 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm29310-201ENSMUST00000185468 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21825-201ENSMUST00000185728 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm29109-201ENSMUST00000185895 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21896-201ENSMUST00000186520 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21873-201ENSMUST00000186728 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21794-201ENSMUST00000187056 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21880-201ENSMUST00000187275 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21826-201ENSMUST00000187451 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21198-201ENSMUST00000188393 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21749-201ENSMUST00000189343 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21901-201ENSMUST00000189568 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm29424-201ENSMUST00000189716 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm28599-201ENSMUST00000189838 694 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21867-201ENSMUST00000189917 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm29269-201ENSMUST00000190087 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21722-201ENSMUST00000190153 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm28423-201ENSMUST00000190701 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21899-201ENSMUST00000190745 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21910-201ENSMUST00000191163 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21849-201ENSMUST00000191571 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm28678-201ENSMUST00000191593 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm20910-201ENSMUST00000193268 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm21871-201ENSMUST00000194621 696 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Gm44333-201ENSMUST00000197168 107 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Shmt1P50431 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.38■□□□□ 0.05
Shmt1P50431 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Shmt1P50431 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms