Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GdnfP48540 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.79□□□□□ -0.36
GdnfP48540 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.79□□□□□ -0.36
GdnfP48540 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
GdnfP48540 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.79□□□□□ -0.36
GdnfP48540 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.79□□□□□ -0.36
GdnfP48540 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.79□□□□□ -0.36
GdnfP48540 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
GdnfP48540 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.79□□□□□ -0.36
GdnfP48540 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
GdnfP48540 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
GdnfP48540 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.79□□□□□ -0.36
GdnfP48540 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
GdnfP48540 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
GdnfP48540 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.78□□□□□ -0.36
GdnfP48540 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
GdnfP48540 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.78□□□□□ -0.36
GdnfP48540 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GdnfP48540 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
GdnfP48540 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Gm11434-201ENSMUST00000122379 629 ntBASIC12.78□□□□□ -0.36
GdnfP48540 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.78□□□□□ -0.36
GdnfP48540 Gm5682-201ENSMUST00000173402 505 ntBASIC12.78□□□□□ -0.36
GdnfP48540 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.78□□□□□ -0.36
GdnfP48540 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.78□□□□□ -0.36
GdnfP48540 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
GdnfP48540 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GdnfP48540 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.36
GdnfP48540 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
GdnfP48540 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.77□□□□□ -0.36
GdnfP48540 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GdnfP48540 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
GdnfP48540 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GdnfP48540 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
GdnfP48540 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.77□□□□□ -0.37
GdnfP48540 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.77□□□□□ -0.37
GdnfP48540 Gm7230-201ENSMUST00000173026 815 ntBASIC12.77□□□□□ -0.37
GdnfP48540 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GdnfP48540 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GdnfP48540 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GdnfP48540 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GdnfP48540 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms