Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.25□□□□□ -0.13
Gli1P47806 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.25□□□□□ -0.13
Gli1P47806 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.25□□□□□ -0.13
Gli1P47806 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.25□□□□□ -0.13
Gli1P47806 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Gli1P47806 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Gli1P47806 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Gli1P47806 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.25□□□□□ -0.13
Gli1P47806 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Gli1P47806 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.24□□□□□ -0.13
Gli1P47806 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.24□□□□□ -0.13
Gli1P47806 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Gli1P47806 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 Gm12008-201ENSMUST00000117791 755 ntBASIC14.24□□□□□ -0.13
Gli1P47806 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.24□□□□□ -0.13
Gli1P47806 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.24□□□□□ -0.13
Gli1P47806 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.24□□□□□ -0.13
Gli1P47806 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.24□□□□□ -0.13
Gli1P47806 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Gli1P47806 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gli1P47806 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Gli1P47806 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.23□□□□□ -0.13
Gli1P47806 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Gli1P47806 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gli1P47806 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gli1P47806 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Gli1P47806 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.23□□□□□ -0.13
Gli1P47806 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.23□□□□□ -0.13
Gli1P47806 Gm17271-201ENSMUST00000165535 355 ntBASIC14.23□□□□□ -0.13
Gli1P47806 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gli1P47806 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Gli1P47806 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.23□□□□□ -0.13
Gli1P47806 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Gli1P47806 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gli1P47806 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gli1P47806 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Gli1P47806 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.23□□□□□ -0.13
Gli1P47806 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gli1P47806 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms