Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Nedd4P46935 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.42■□□□□ 0.38
Nedd4P46935 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Nedd4P46935 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nedd4P46935 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm5187-201ENSMUST00000117317 991 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Nedd4P46935 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm38241-201ENSMUST00000192641 898 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.41■□□□□ 0.38
Nedd4P46935 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Nedd4P46935 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.41■□□□□ 0.38
Nedd4P46935 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.41■□□□□ 0.38
Nedd4P46935 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Nedd4P46935 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.4■□□□□ 0.38
Nedd4P46935 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Nedd4P46935 Gm29649-201ENSMUST00000185649 419 ntBASIC17.4■□□□□ 0.38
Nedd4P46935 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.4■□□□□ 0.38
Nedd4P46935 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.4■□□□□ 0.38
Nedd4P46935 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC17.4■□□□□ 0.38
Nedd4P46935 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.4■□□□□ 0.38
Nedd4P46935 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Nedd4P46935 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nedd4P46935 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Nedd4P46935 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd4P46935 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nedd4P46935 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd4P46935 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd4P46935 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC17.39■□□□□ 0.37
Nedd4P46935 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Nedd4P46935 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.39■□□□□ 0.37
Nedd4P46935 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Nedd4P46935 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC17.39■□□□□ 0.37
Nedd4P46935 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.39■□□□□ 0.37
Nedd4P46935 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.39■□□□□ 0.37
Nedd4P46935 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd4P46935 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd4P46935 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.39■□□□□ 0.37
Nedd4P46935 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Nedd4P46935 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.39■□□□□ 0.37
Nedd4P46935 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Nedd4P46935 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Nedd4P46935 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.38■□□□□ 0.37
Nedd4P46935 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Nedd4P46935 Gm8565-201ENSMUST00000183259 1014 ntBASIC17.38■□□□□ 0.37
Nedd4P46935 Gm27243-201ENSMUST00000183964 521 ntBASIC17.38■□□□□ 0.37
Nedd4P46935 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC17.38■□□□□ 0.37
Nedd4P46935 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nedd4P46935 Gm7619-201ENSMUST00000210649 1282 ntBASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms