Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox6P40645 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox6P40645 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
Sox6P40645 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox6P40645 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sox6P40645 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sox6P40645 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Sox6P40645 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sox6P40645 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sox6P40645 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Gm13036-201ENSMUST00000117799 748 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Gm12350-201ENSMUST00000121208 462 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.71□□□□□ -0.21
Sox6P40645 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox6P40645 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox6P40645 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Gm9682-201ENSMUST00000197505 556 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox6P40645 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.71□□□□□ -0.21
Sox6P40645 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.71□□□□□ -0.21
Sox6P40645 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox6P40645 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.71□□□□□ -0.22
Sox6P40645 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sox6P40645 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox6P40645 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.7□□□□□ -0.22
Sox6P40645 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.7□□□□□ -0.22
Sox6P40645 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox6P40645 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox6P40645 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.69□□□□□ -0.22
Sox6P40645 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Sox6P40645 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox6P40645 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox6P40645 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.69□□□□□ -0.22
Sox6P40645 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.69□□□□□ -0.22
Sox6P40645 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sox6P40645 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms