Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Cxcl12P40224 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cxcl12P40224 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm15429-201ENSMUST00000151268 798 ntBASIC14.9□□□□□ -0.02
Cxcl12P40224 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm2495-201ENSMUST00000191160 466 ntBASIC14.9□□□□□ -0.02
Cxcl12P40224 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm8463-201ENSMUST00000208573 613 ntBASIC14.9□□□□□ -0.02
Cxcl12P40224 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.9□□□□□ -0.02
Cxcl12P40224 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Cxcl12P40224 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.9□□□□□ -0.02
Cxcl12P40224 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.89□□□□□ -0.03
Cxcl12P40224 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Gm12928-201ENSMUST00000117115 573 ntBASIC14.89□□□□□ -0.03
Cxcl12P40224 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.89□□□□□ -0.03
Cxcl12P40224 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.89□□□□□ -0.03
Cxcl12P40224 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC14.89□□□□□ -0.03
Cxcl12P40224 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.89□□□□□ -0.03
Cxcl12P40224 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.89□□□□□ -0.03
Cxcl12P40224 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Cxcl12P40224 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cxcl12P40224 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cxcl12P40224 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.88□□□□□ -0.03
Cxcl12P40224 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Gm5940-201ENSMUST00000117582 1068 ntBASIC14.88□□□□□ -0.03
Cxcl12P40224 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Gm10275-202ENSMUST00000168697 495 ntBASIC14.88□□□□□ -0.03
Cxcl12P40224 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Gm7399-201ENSMUST00000032395 858 ntBASIC14.88□□□□□ -0.03
Cxcl12P40224 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.88□□□□□ -0.03
Cxcl12P40224 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cxcl12P40224 Gm10275-201ENSMUST00000092620 635 ntBASIC14.88□□□□□ -0.03
Cxcl12P40224 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cxcl12P40224 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms