Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Tnfrsf1bP25119 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Gm14701-201ENSMUST00000117156 348 ntBASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Gm9182-201ENSMUST00000217829 639 ntBASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tnfrsf1bP25119 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tnfrsf1bP25119 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Gm5312-201ENSMUST00000203728 547 ntBASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.47□□□□□ -0.25
Tnfrsf1bP25119 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms