Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BdnfP21237 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
BdnfP21237 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.99□□□□□ -0.17
BdnfP21237 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.99□□□□□ -0.17
BdnfP21237 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Gm6550-201ENSMUST00000187574 993 ntBASIC13.99□□□□□ -0.17
BdnfP21237 Gm5864-201ENSMUST00000202263 970 ntBASIC13.99□□□□□ -0.17
BdnfP21237 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.99□□□□□ -0.17
BdnfP21237 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BdnfP21237 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
BdnfP21237 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
BdnfP21237 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
BdnfP21237 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
BdnfP21237 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.98□□□□□ -0.17
BdnfP21237 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
BdnfP21237 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Gm7153-201ENSMUST00000117092 455 ntBASIC13.98□□□□□ -0.17
BdnfP21237 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.98□□□□□ -0.17
BdnfP21237 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.98□□□□□ -0.17
BdnfP21237 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
BdnfP21237 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.98□□□□□ -0.17
BdnfP21237 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
BdnfP21237 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.98□□□□□ -0.17
BdnfP21237 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
BdnfP21237 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
BdnfP21237 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
BdnfP21237 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.97□□□□□ -0.17
BdnfP21237 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.97□□□□□ -0.17
BdnfP21237 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.97□□□□□ -0.17
BdnfP21237 Gm7787-201ENSMUST00000216858 688 ntBASIC13.97□□□□□ -0.17
BdnfP21237 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
BdnfP21237 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.97□□□□□ -0.17
BdnfP21237 Matn2-206ENSMUST00000228570 2798 ntBASIC13.97□□□□□ -0.17
BdnfP21237 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
BdnfP21237 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms