Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Lire1P11260 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Lire1P11260 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.84□□□□□ -0.19
Lire1P11260 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.84□□□□□ -0.19
Lire1P11260 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.84□□□□□ -0.19
Lire1P11260 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Gm11025-201ENSMUST00000140773 466 ntBASIC13.84□□□□□ -0.19
Lire1P11260 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.84□□□□□ -0.19
Lire1P11260 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.84□□□□□ -0.19
Lire1P11260 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Lire1P11260 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Lire1P11260 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.84□□□□□ -0.19
Lire1P11260 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.84□□□□□ -0.19
Lire1P11260 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Lire1P11260 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lire1P11260 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lire1P11260 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.83□□□□□ -0.19
Lire1P11260 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lire1P11260 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Lire1P11260 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Lire1P11260 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Lire1P11260 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.83□□□□□ -0.2
Lire1P11260 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.83□□□□□ -0.2
Lire1P11260 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.83□□□□□ -0.2
Lire1P11260 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.83□□□□□ -0.2
Lire1P11260 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Lire1P11260 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Lire1P11260 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Lire1P11260 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.82□□□□□ -0.2
Lire1P11260 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.82□□□□□ -0.2
Lire1P11260 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.82□□□□□ -0.2
Lire1P11260 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lire1P11260 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Lire1P11260 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.82□□□□□ -0.2
Lire1P11260 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Lire1P11260 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.82□□□□□ -0.2
Lire1P11260 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.82□□□□□ -0.2
Lire1P11260 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.82□□□□□ -0.2
Lire1P11260 Gm25911-201ENSMUST00000157621 56 ntBASIC13.82□□□□□ -0.2
Lire1P11260 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms