Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Chmp6P0C0A3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Gm11025-201ENSMUST00000140773 466 ntBASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Chmp6P0C0A3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.86■□□□□ 0.13
Chmp6P0C0A3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.86■□□□□ 0.13
Chmp6P0C0A3 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Gm43575-201ENSMUST00000196420 516 ntBASIC15.85■□□□□ 0.13
Chmp6P0C0A3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 112.3 ms