Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cops4O88544 Gm8097-201ENSMUST00000117903 829 ntBASIC13.48□□□□□ -0.25
Cops4O88544 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.48□□□□□ -0.25
Cops4O88544 Gm43767-201ENSMUST00000198933 381 ntBASIC13.48□□□□□ -0.25
Cops4O88544 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.48□□□□□ -0.25
Cops4O88544 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.48□□□□□ -0.25
Cops4O88544 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cops4O88544 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cops4O88544 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.48□□□□□ -0.25
Cops4O88544 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.48□□□□□ -0.25
Cops4O88544 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cops4O88544 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cops4O88544 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.47□□□□□ -0.25
Cops4O88544 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cops4O88544 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.47□□□□□ -0.25
Cops4O88544 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Gm18669-201ENSMUST00000216049 778 ntBASIC13.47□□□□□ -0.25
Cops4O88544 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cops4O88544 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.47□□□□□ -0.25
Cops4O88544 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cops4O88544 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cops4O88544 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.46□□□□□ -0.25
Cops4O88544 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cops4O88544 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.46□□□□□ -0.25
Cops4O88544 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cops4O88544 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cops4O88544 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.46□□□□□ -0.25
Cops4O88544 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cops4O88544 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Acot6-202ENSMUST00000222921 3622 ntBASIC13.46□□□□□ -0.26
Cops4O88544 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.46□□□□□ -0.26
Cops4O88544 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cops4O88544 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.46□□□□□ -0.26
Cops4O88544 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Cops4O88544 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
Cops4O88544 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cops4O88544 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.45□□□□□ -0.26
Cops4O88544 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cops4O88544 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms