Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cldn5O54942 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cldn5O54942 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.12■□□□□ 0.01
Cldn5O54942 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cldn5O54942 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cldn5O54942 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cldn5O54942 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.11■□□□□ 0.01
Cldn5O54942 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.11■□□□□ 0.01
Cldn5O54942 Gm10275-202ENSMUST00000168697 495 ntBASIC15.11■□□□□ 0.01
Cldn5O54942 Gm27533-201ENSMUST00000183800 152 ntBASIC15.11■□□□□ 0.01
Cldn5O54942 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.11■□□□□ 0.01
Cldn5O54942 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Cldn5O54942 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Gm10275-201ENSMUST00000092620 635 ntBASIC15.11■□□□□ 0.01
Cldn5O54942 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.11■□□□□ 0.01
Cldn5O54942 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cldn5O54942 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cldn5O54942 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cldn5O54942 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn5O54942 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cldn5O54942 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.1■□□□□ 0.01
Cldn5O54942 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cldn5O54942 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Cldn5O54942 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cldn5O54942 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cldn5O54942 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cldn5O54942 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cldn5O54942 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Cldn5O54942 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Gm24543-201ENSMUST00000103867 82 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Gm13453-201ENSMUST00000118708 357 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 Gm14042-201ENSMUST00000120139 833 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Gm25144-201ENSMUST00000179561 110 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 Gm25352-201ENSMUST00000179815 110 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.09■□□□□ 0.01
Cldn5O54942 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cldn5O54942 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 110.6 ms