Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Alx4O35137 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Alx4O35137 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Gm45003-201ENSMUST00000205875 2158 ntBASIC13□□□□□ -0.33
Alx4O35137 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Ankra2-208ENSMUST00000226100 1476 ntBASIC13□□□□□ -0.33
Alx4O35137 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Gm14859-201ENSMUST00000117752 357 ntBASIC13□□□□□ -0.33
Alx4O35137 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13□□□□□ -0.33
Alx4O35137 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
Alx4O35137 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13□□□□□ -0.33
Alx4O35137 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Gm19863-201ENSMUST00000192480 2218 ntBASIC13□□□□□ -0.33
Alx4O35137 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Alx4O35137 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13□□□□□ -0.33
Alx4O35137 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Alx4O35137 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.99□□□□□ -0.33
Alx4O35137 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Alx4O35137 Gm44357-201ENSMUST00000195897 142 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm19658-201ENSMUST00000196231 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44367-201ENSMUST00000196836 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44350-201ENSMUST00000197197 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44390-201ENSMUST00000197533 144 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44313-201ENSMUST00000198018 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44486-201ENSMUST00000198508 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44314-201ENSMUST00000199263 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44394-201ENSMUST00000199558 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44484-201ENSMUST00000199873 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44466-201ENSMUST00000200264 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Gm44359-201ENSMUST00000200671 138 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.99□□□□□ -0.33
Alx4O35137 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Alx4O35137 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.99□□□□□ -0.33
Alx4O35137 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms