Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcf11G3X9Z4 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Gm12416-201ENSMUST00000120911 1008 ntBASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 AC155258.1-201ENSMUST00000219303 253 ntBASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Gm18307-201ENSMUST00000206864 949 ntBASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Gm7446-201ENSMUST00000221035 1240 ntBASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcf11G3X9Z4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Mir1894-201ENSMUST00000122802 81 ntBASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Gm8775-201ENSMUST00000170943 1327 ntBASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcf11G3X9Z4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Gm9002-201ENSMUST00000178437 499 ntBASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Gm27839-201ENSMUST00000184242 106 ntBASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcf11G3X9Z4 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Gm13829-201ENSMUST00000119600 138 ntBASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 CT030704.2-201ENSMUST00000228887 494 ntBASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC21.71■■□□□ 1.07
Pcf11G3X9Z4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC21.7■■□□□ 1.07
Pcf11G3X9Z4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Pcf11G3X9Z4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms