Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.78□□□□□ -0.04
Ccdc149F6V035 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.78□□□□□ -0.04
Ccdc149F6V035 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.78□□□□□ -0.04
Ccdc149F6V035 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Gm45453-201ENSMUST00000211758 853 ntBASIC14.78□□□□□ -0.04
Ccdc149F6V035 Gm46209-201ENSMUST00000217912 553 ntBASIC14.78□□□□□ -0.04
Ccdc149F6V035 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccdc149F6V035 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.78□□□□□ -0.04
Ccdc149F6V035 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.77□□□□□ -0.04
Ccdc149F6V035 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccdc149F6V035 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Syt7-204ENSMUST00000223586 1344 ntBASIC14.76□□□□□ -0.05
Ccdc149F6V035 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.76□□□□□ -0.05
Ccdc149F6V035 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Gm2423-201ENSMUST00000074863 733 ntBASIC14.76□□□□□ -0.05
Ccdc149F6V035 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccdc149F6V035 Asic1-205ENSMUST00000228185 1818 ntBASIC14.76□□□□□ -0.05
Ccdc149F6V035 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccdc149F6V035 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms