Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm24543-201ENSMUST00000103867 82 ntBASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm12428-201ENSMUST00000119844 727 ntBASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhb9E9Q5G2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Gm17837-201ENSMUST00000186435 985 ntBASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Gm6888-201ENSMUST00000221983 706 ntBASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhb9E9Q5G2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Gm45453-201ENSMUST00000211758 853 ntBASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Shd-206ENSMUST00000225145 998 ntBASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdhb9E9Q5G2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gm23547-201ENSMUST00000158210 271 ntBASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gm27306-201ENSMUST00000183970 107 ntBASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Gm16476-201ENSMUST00000221544 139 ntBASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb9E9Q5G2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms