Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Srp54bE9PXC0 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Gm6222-201ENSMUST00000120787 396 ntBASIC14.35□□□□□ -0.11
Srp54bE9PXC0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Mir1897-201ENSMUST00000122581 272 ntBASIC14.35□□□□□ -0.11
Srp54bE9PXC0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Srp54bE9PXC0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gm14719-201ENSMUST00000121891 340 ntBASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Olfr286-202ENSMUST00000205305 969 ntBASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gm7730-201ENSMUST00000212486 454 ntBASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gm5186-201ENSMUST00000218781 920 ntBASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Srp54bE9PXC0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Srp54bE9PXC0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.33□□□□□ -0.12
Srp54bE9PXC0 Gm27838-201ENSMUST00000184829 128 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms