Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Clca3bE9PUL3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Gm8410-201ENSMUST00000117225 605 ntBASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Gm25144-201ENSMUST00000179561 110 ntBASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Gm25352-201ENSMUST00000179815 110 ntBASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Clca3bE9PUL3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Clca3bE9PUL3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Gm24543-201ENSMUST00000103867 82 ntBASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Gm6888-201ENSMUST00000221983 706 ntBASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Clca3bE9PUL3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clca3bE9PUL3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Clca3bE9PUL3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Clca3bE9PUL3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms