Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Hfm1D3Z4R1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hfm1D3Z4R1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Hfm1D3Z4R1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Hfm1D3Z4R1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Gm8565-201ENSMUST00000183259 1014 ntBASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 CU024892.2-201ENSMUST00000224608 832 ntBASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hfm1D3Z4R1 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gm12384-201ENSMUST00000119228 919 ntBASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gm27772-201ENSMUST00000184900 187 ntBASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gm44397-201ENSMUST00000195950 113 ntBASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gm40466-201ENSMUST00000212174 422 ntBASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Hfm1D3Z4R1 Gm16011-201ENSMUST00000121567 2662 ntBASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gm4959-201ENSMUST00000197271 1044 ntBASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Gm37015-201ENSMUST00000192763 1521 ntBASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hfm1D3Z4R1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Gm38671-201ENSMUST00000200573 130 ntBASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Gm6013-201ENSMUST00000212264 699 ntBASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hfm1D3Z4R1 Gm12485-201ENSMUST00000119641 291 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm16177-201ENSMUST00000120728 718 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm8801-201ENSMUST00000173255 1064 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Mir8109-201ENSMUST00000184375 117 ntBASIC20.1■□□□□ 0.81
Hfm1D3Z4R1 Gm18827-201ENSMUST00000188341 790 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms