Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Gm8396-201ENSMUST00000057361 823 ntBASIC13.19□□□□□ -0.3
Gm3543D3Z235 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gm3543D3Z235 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.18□□□□□ -0.3
Gm3543D3Z235 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.18□□□□□ -0.3
Gm3543D3Z235 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.18□□□□□ -0.3
Gm3543D3Z235 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gm3543D3Z235 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Gm13365-201ENSMUST00000121188 973 ntBASIC13.17□□□□□ -0.3
Gm3543D3Z235 Gm11745-201ENSMUST00000121669 448 ntBASIC13.17□□□□□ -0.3
Gm3543D3Z235 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.17□□□□□ -0.3
Gm3543D3Z235 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.17□□□□□ -0.3
Gm3543D3Z235 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.17□□□□□ -0.3
Gm3543D3Z235 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gm3543D3Z235 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.16□□□□□ -0.3
Gm3543D3Z235 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms