Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmf1B9EKI3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tmf1B9EKI3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Gm38294-201ENSMUST00000192831 381 ntBASIC19.7■□□□□ 0.74
Tmf1B9EKI3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tmf1B9EKI3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Gm13223-201ENSMUST00000118609 747 ntBASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tmf1B9EKI3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Gm27631-201ENSMUST00000184163 466 ntBASIC19.68■□□□□ 0.74
Tmf1B9EKI3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tmf1B9EKI3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Gm24543-201ENSMUST00000103867 82 ntBASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Gm27533-201ENSMUST00000183800 152 ntBASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tmf1B9EKI3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Gm45453-201ENSMUST00000211758 853 ntBASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Gm4081-201ENSMUST00000195287 1838 ntBASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tmf1B9EKI3 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms