Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm38225-201ENSMUST00000194001 393 ntBASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm43474-201ENSMUST00000196415 774 ntBASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Atg4a-psA0A0G2JFS9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm23935-201ENSMUST00000102303 57 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm24270-201ENSMUST00000102326 57 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm24245-201ENSMUST00000157318 57 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm37935-201ENSMUST00000192012 982 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm2756-201ENSMUST00000195851 400 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm43125-201ENSMUST00000201724 730 ntBASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm43575-201ENSMUST00000196420 516 ntBASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm2213-201ENSMUST00000197485 688 ntBASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.67■□□□□ 0.42
Atg4a-psA0A0G2JFS9 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms