Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav21-dv12A0A075B6C4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav21-dv12A0A075B6C4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mir5126-201ENSMUST00000175513 77 ntBASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm27300-201ENSMUST00000184085 97 ntBASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm27335-201ENSMUST00000184758 97 ntBASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Gm27628-201ENSMUST00000184911 107 ntBASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav21-dv12A0A075B6C4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav21-dv12A0A075B6C4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav21-dv12A0A075B6C4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav21-dv12A0A075B6C4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms