Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Trav18A0A075B656 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.96□□□□□ -0.49
Trav18A0A075B656 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav18A0A075B656 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav18A0A075B656 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Gm13036-201ENSMUST00000117799 748 ntBASIC11.95□□□□□ -0.5
Trav18A0A075B656 Gm9726-201ENSMUST00000180321 678 ntBASIC11.95□□□□□ -0.5
Trav18A0A075B656 Mir8098-201ENSMUST00000184011 137 ntBASIC11.95□□□□□ -0.5
Trav18A0A075B656 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.95□□□□□ -0.5
Trav18A0A075B656 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trav18A0A075B656 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav18A0A075B656 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 AC131743.5-201ENSMUST00000220775 1618 ntBASIC11.94□□□□□ -0.5
Trav18A0A075B656 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm13884-201ENSMUST00000118103 829 ntBASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm5864-201ENSMUST00000202263 970 ntBASIC11.94□□□□□ -0.5
Trav18A0A075B656 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.94□□□□□ -0.5
Trav18A0A075B656 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav18A0A075B656 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms